dear friend, impacted wisdom teeth sometimes really create a deep throbbing pain
, especially when they are infected/ decayed. Sometimes, they may lead to space infactions as well (infection and swelling of surrounding tissues). The BEST TREATMENT FOR THESE IS TO GET THEM EXTRACTED. since they are considered VESTIGIAL ORGANS (organs/ tissues having no functional role). Also, even if your pain subsides anyhow, there are very good chances, that it mey reccur within a few months..
So seek an opinion from a dentist
, get a Xray done, and get them extrated without any sort of hesitation.
Lastly you need not to worry about these extraction, as it won't lead to any sort of problem for your rest of the teeth.